
nature-academic-search
Search literature across sources, verify or manage citations, and build MeSH strategies or citation-impact audits. Use for 文献检索、引文核对、参考文献管理、严格他引 and evidence-backed citer profiles; not for translating a paper or drafting manuscript prose.
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Install
Works with every agent the skills CLI supports.
npx skills add https://github.com/yuan1z0825/nature-skills --skill nature-academic-search- 01
Install
Run the command in your project. The CLI asks which agents to install for.
- 02
Describe the task
Ask your agent for something this skill covers. It loads nature-academic-search automatically when relevant.
- 03
Review the result
The agent follows the SKILL.md steps, scripts and references bundled with the skill.
Security audits
Independent scans of the skill's instructions and bundled files.
SKILL.md
The instructions your agent reads when the skill is triggered.
Academic Search — Router
Routing protocol
For local citation-file conversion with complete supplied records, load
references/workflows/wf4-citation-file-mgmt.md and its format reference directly.
Source lookup, API setup, and network preflight apply only when retrieval or verification is
needed; do not require them for a requested offline conversion.
For a new task, load the core and matching resources below. Reuse already loaded guidance on follow-ups; load more only when the task needs it.
1. Load the manifest and the core layer
Read manifest.yaml. It declares the workflow axis, the allowed values, and the file paths each value maps to.
Also read every file listed under always_load:
static/core/tools.md— the MCP tool inventory (core search, extended search, PubMed utilities) and the shared-module map.static/core/routing-and-ops.md— the T1→T2→T3 source routing quick guide, environment setup, error handling, and limitations.
2. Detect the workflow
Map the user's need to one or more workflow values:
multi-source-search— find literature across sources.citation-verification— verify citations extracted from a document.mesh-strategy— build a MeSH/PubMed search strategy.citation-file-mgmt— convert/manage.nbib/.ris/.bibfiles.reference-mgmt— BibTeX, related-article discovery, ID conversion.strict-other-citation-impact-audit— determine strict independent other-citations, build article-level citation metric tables, identify high-profile citers (academy members, presidents/deans, talent-award holders, fellows, field leaders), and extract how they cited the target paper.
A combined request (for example search then export) may need more than one. State the detected workflow(s) in one short line before proceeding.
3. Load the matching workflow fragment(s)
Read the file mapped for each detected workflow (under references/workflows/). Do not read every workflow. Each workflow file links to the shared modules it needs.
4. Run the workflow using the loaded material
Apply the loaded material in this order:
- Core tools and routing (
core/tools.md,core/routing-and-ops.md) — which MCP tool for which need, and the T1→T2→T3 fallback chain for source retrieval. - The workflow fragment — its specific steps.
- Shared modules and scripts on demand (dedup, citation parser, search strategy, RIS/BibTeX format, format converter).
Report specific tool failures and continue with remaining tools; broaden terms when there are no results; fall back to manual generation from MCP-fetched metadata if a script fails twice.
5. Reach for references only when needed
The files under references/ (and scripts/) are deep references, not defaults. Open them on demand per the references.on_demand table in the manifest — for example references/source-tiers.md for the full reliability classification, references/dedup-engine.md / references/citation-parser.md / references/search-strategy.md / references/ris-bibtex-format.md for the shared modules, and scripts/academic_search.py (no-MCP fallback discovery search) / scripts/format-converter.py / scripts/preflight.py for the tooling.
FAQ
What does the nature-academic-search skill do?
Search literature across sources, verify or manage citations, and build MeSH strategies or citation-impact audits. Use for 文献检索、引文核对、参考文献管理、严格他引 and evidence-backed citer profiles; not for translating a paper or drafting manuscript prose.
How do I install nature-academic-search?
Run npx skills add https://github.com/yuan1z0825/nature-skills --skill nature-academic-search in your project. The skills CLI detects the agents you use and copies the skill into the right folder. For Claude Code you can also place the skill folder at ~/.claude/skills/nature-academic-search/ (personal) or .claude/skills/nature-academic-search/ (project).
Which AI agents can use nature-academic-search?
Any agent that supports the open Agent Skills format (a folder with a SKILL.md file), including Claude Code, Codex, Cursor, GitHub Copilot, Gemini CLI, Windsurf, Cline, OpenCode and more.
Is nature-academic-search safe to install?
Security partners have reviewed it: Gen Agent Trust Hub passed; Socket passed; Snyk passed. As with any skill, read the SKILL.md and bundled scripts before installing.
Who maintains nature-academic-search?
It is published by yuan1z0825 in yuan1z0825/nature-skills. It has 15,424 recorded installs.
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